I have a site, in a site collection (obviously) using MOSS2007. The usage reports are very low. Yesterday it claims only two users visited. Seeing that this site has the "Daily Dilbert" I was sure that this was wrong.
A quick look at yesterday's log file shows shed loads - I got up to 20 users before getting half way through the file. Many of those users don't show on th user list either.
All the settings look OK - something is obviusly being registered - the Landing Page (the one with the Dilbert) has some hits against it - just not nearly as many as the hard logs say.
It means I have lost confidence in the usage reports across the site collection now!
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